Hi community!
I am using Webina for tool-like receptor research. However an "Error Converting File!" issue occurred when uploading proteins .
This issue will happen when:
1 uploading .pdb file downloaded from rcsb with option "Add hydrogen atoms at PH (7.4)" clicked
2 uploading .pqr file generated with PDB2PQR, no matter if "Add hydrogen atoms at PH (7.4)" clicked
3 uploading .pdb file manually deleted ligands and added hydrogen with pymol, no matter if "Add hydrogen atoms at PH (7.4)" clicked
This issue will NOT happen when uploading .pdb file downloaded from rcsb WITHOUT option "Add hydrogen atoms at PH (7.4)" clicked, but I am not sure if its docking result reasonable.
Best regards!
screenshot: